Projects

Open-source tools and research projects I've built or contributed to.

tedana

An open-source Python library for denoising multi-echo fMRI data. TE-dependent analysis for separating BOLD signal from non-BOLD noise.

PythonfMRISignal ProcessingOpen Source

Rica

A Python tool for generating interactive reports to visualize and classify ICA components from multi-echo fMRI data.

PythonICAVisualizationfMRI

maPCA

Moving average PCA for dimensionality estimation in fMRI data. Implements multiple PCA-based algorithms for component selection.

PythonPCADimensionality Reduction

pySPFM

A Python package for Sparse Paradigm Free Mapping — hemodynamic deconvolution of fMRI data without prior knowledge of stimulus timing.

PythonfMRIDeconvolutionSparse Optimization

PhD Thesis Website

Interactive web version of my PhD thesis on hemodynamic deconvolution of fMRI data, built for accessible reading.

WebAcademicInteractive

Phys2bids

A Python tool for converting physiological recordings to BIDS format, enabling standardized sharing of MRI-associated physiological data.

PythonBIDSPhysiological Data